- Fixed Documentation for Consistency

- Added more documentation, predominantly in the Math Library

doxy/Doxyfile

@@ -784,7 +784,7 @@ SHOW_USED_FILES        = YES
 # (if specified).
 # The default value is: YES.
 
-SHOW_FILES             = NO
+SHOW_FILES             = YES
 
 # Set the SHOW_NAMESPACES tag to NO to disable the generation of the Namespaces
 # page. This will remove the Namespaces entry from the Quick Index and from the
@@ -1306,7 +1306,7 @@ CLANG_DATABASE_PATH    =
 # classes, structs, unions or interfaces.
 # The default value is: YES.
 
-ALPHABETICAL_INDEX     = NO
+ALPHABETICAL_INDEX     = YES
 
 # The IGNORE_PREFIX tag can be used to specify a prefix (or a list of prefixes)
 # that should be ignored while generating the index headers. The IGNORE_PREFIX

doxy/Doxyfile.in

@@ -784,7 +784,7 @@ SHOW_USED_FILES        = YES
 # (if specified).
 # The default value is: YES.
 
-SHOW_FILES             = NO
+SHOW_FILES             = YES
 
 # Set the SHOW_NAMESPACES tag to NO to disable the generation of the Namespaces
 # page. This will remove the Namespaces entry from the Quick Index and from the
@@ -1306,7 +1306,7 @@ CLANG_DATABASE_PATH    =
 # classes, structs, unions or interfaces.
 # The default value is: YES.
 
-ALPHABETICAL_INDEX     = NO
+ALPHABETICAL_INDEX     = YES
 
 # The IGNORE_PREFIX tag can be used to specify a prefix (or a list of prefixes)
 # that should be ignored while generating the index headers. The IGNORE_PREFIX

doxy/header.html

@@ -11,7 +11,7 @@
 <link href="$relpath^tabs.css" rel="stylesheet" type="text/css"/>
 <!--BEGIN DISABLE_INDEX-->
   <!--BEGIN FULL_SIDEBAR-->
-<script type="text/javascript">var page_layout=1;</script>
+<script type="text/javascript">var layout=1;</script>
   <!--END FULL_SIDEBAR-->
 <!--END DISABLE_INDEX-->
 <script type="text/javascript" src="$relpath^jquery.js"></script>